Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQSSQLLPLGSLLLSFATPLAQADALHDQASALFKPIPEQVTELRGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNAAQFWDGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQLGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE |
| 1ZZH Chain:A ((4-324)) | ------------------------ALREEAKGLFEVIPMQAP------VTRDKIDLGAMLFFDPRMSKSGVFSCQSCHNVGLGGVDGLETSIGHGWQKGPRNAPTALNAVFNVAQFWDGRAPDLAAQA---------MNNTPENLVATVQSMPGYVEAFAKAFPGQKDPISFDNFALAVEAFEATLITPNSKFDQWLMGADGAMSADEKAGLKLFIDTGCAACHNGINIGGNGYYPFGVVEKP----------GRFAVTATADDEYVFRAGPLRNIALTAPYFHSGKVWDLREAVSVMANSQLGATLDDTQVDQITAFLGTLTGEQPEVVHPILPVRSAQTPRP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89203 for 2410 contacts (-37.0/contact) +
2D Compatibility (PS) -31847 + (NN) -24719 + (LL) 2532
1D Compatibility (HY) -30400 + (ID) 8900
Total energy: -182537.0 ( -75.74 by residue)
QMean score : 0.517
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