Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
4J7W Chain:A ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHAAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
4J7W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54787 for 1114 contacts (-49.2/contact) +
2D Compatibility (PS) -15176 + (NN) -15815 + (LL) 4708
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -87620.0 ( -78.65 by residue)
QMean score : 0.778
(partial model without unconserved sides chains):
PDB file :
Tito_4J7W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J7W-query.scw
PDB file :
Tito_Scwrl_4J7W.pdb
: