Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLQQLFENNVRWAEAIKQEDPDFFAKLARQQTPEYLWIGCSDARVPANEIVGMLPGDLFVHRNVANVVLHTDLNCLSVIQFAVDVLKVKHILVTGHYGCGGVRASLHNDQLGLIDGWLRSIRDLAYEYREHLEQLPTEEERVDRLCELNVIQQVANVSHTSIVQNAWHRGQSLSVHGCIYGIKDGLWKNLNVTVSGLDQLPPQYRLSPLGGCC
2A8C Chain:A ((1-206))
MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGKL-SPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDGFLVDQGVMATSRETLEISYR--------
General information:
TITO was launched using:
RESULT:
Template:
2A8C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149759 for 1522 contacts (-98.4/contact) +
2D Compatibility (PS) -22018 + (NN) -8524 + (LL) -188
1D Compatibility (HY) -23200 + (ID) 5150
Total energy: -208839.0 ( -137.21 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2A8C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A8C-query.scw
PDB file :
Tito_Scwrl_2A8C.pdb
: