Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIMGLIANYPIALAPGMGLNAFFTYTVVLHMGHSWQVALGAVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGMGDLTKPAPILATLGFILIVALEARSVTGAVLIGILVVTAIAILLGVTQFGGVVSMPPSLAPTFLQLDIKGALDIGLVSVIFAFLFVDLFDNSGTLIGVAKRAGLMGKDGHMPKMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFAPLAGSVPAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMPFTYSIATGIAFGFISWTAIKVLSGRWRELNPALVILSVLFVIKLGFFNA |
2JXF Chain:A ((7-25)) | -------LEVFWAKHMWNFISGIQYL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 260 for 69 contacts (3.8/contact) +
2D Compatibility (PS) -1898 + (NN) 641 + (LL) 34536
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 31789.0 ( 460.71 by residue)
QMean score : 0.451
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