Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPQYPTRLPCGSRVLDLARPHVMGILNVTPDSFSDGGRYDRLDDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISVDTSTPAVMRETARLGAGLINDVRSLQRDGALDAAVDSGLAVCLMHMRGEPQTMQ-DAPAYQDVVAEVGAFLQERVDACVAAGIDRERLLLDPGFGFAKT-LEHNLVLFRHLQAL-----HGLGLPLLVGVSRKSMIGKVL-GREVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD |
| 2Y5S Chain:A ((8-290)) | ------PAPLQCGRFELTFERPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEAL-RPLNVPLSIDTYKPAVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198171 for 2298 contacts (-86.2/contact) +
2D Compatibility (PS) -28709 + (NN) -17675 + (LL) -64
1D Compatibility (HY) -22000 + (ID) 6900
Total energy: -273519.0 ( -119.02 by residue)
QMean score : 0.594
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