Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
4MML Chain:A ((4-70))
---GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFAQFVILLKNTVSQMVYKHAISTVVPSRPVRL------------
General information:
TITO was launched using:
RESULT:
Template:
4MML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46385 for 406 contacts (-114.2/contact) +
2D Compatibility (PS) -7327 + (NN) -1527 + (LL) -192
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -69931.0 ( -172.24 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_4MML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MML-query.scw
PDB file :
Tito_Scwrl_4MML.pdb
: