Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLSAFFEASFSAELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWADFDAELAAISLSALLDGLWLESGLNPATFTPRQGVQICEAWVDGLEAGAHRRFRRAMEAC
3CRJ Chain:A ((19-169))
------------------IMQATYRALREHGYADLTIQRIADEYGKSTAAVHYYYDTKDDLLA-AFLDYL--LERFVDSIHDVETTDPEARLNLLLDELLVKPQENPDLSVALLEMRSQAPYKEAFSDRFRQNDEYVRYMLKAVINHGIDEGVFTDVDAEHVTRSLLTIIDG-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100879 for 1023 contacts (-98.6/contact) +
2D Compatibility (PS) -16886 + (NN) -12965 + (LL) 4932
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -134598.0 ( -131.57 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_3CRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CRJ-query.scw
PDB file :
Tito_Scwrl_3CRJ.pdb
: