Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSADKPEQPEHDQEMPLVSHLTELRTRLLRSVAAIFLIFAGLFYFSQKIYTLVSEPLRRFLPEGTSMIATDVASPFLAPFKLTMVVALFLAMPVILAQVWGFIAPGLYKHEKRVALPLLVSSIILFYAGMAFAYFLVFPMIFHFFASVTPEGVAMMTDINSYLDFVLTLFFAFGVAFEIPVATVLLIWIGVVDVDYLKKIRPYVIIGCFVVGMVLTPPDIFSQTMLAVPMWLLFEIGLLFGRLV---RKRGEHPDDQPASDGDQPPATRQ |
3EML Chain:A ((48-145)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------LNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFV--LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75902 for 486 contacts (-156.2/contact) +
2D Compatibility (PS) -8608 + (NN) 4900 + (LL) 14508
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -75152.0 ( -154.63 by residue)
QMean score : 0.119
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