Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTILVTGSAGFIGANFVLDWLALH-DEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIGDSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEPEAKAAFRFLHVSTDEVYGSL-----------APSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLEAGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAIDATRLERELGWKPAET-FETGIRKTVRWYLDNQDWVANVTSGAYREWVGKQYA |
1KEP Chain:A ((7-328)) | --IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGD-RVELVVGDIADAELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE-KFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD---------HVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDW------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117654 for 2624 contacts (-44.8/contact) +
2D Compatibility (PS) -32878 + (NN) -17793 + (LL) 3044
1D Compatibility (HY) -24400 + (ID) 7850
Total energy: -197531.0 ( -75.28 by residue)
QMean score : 0.456
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