Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQ--DAPLLSEKDRQGKAFADADCFP
1EPZ Chain:A ((8-176))
----KTSLDGAIIIEPEVYTDERGYFMETFNEAIFQEN-GLEVRFVQDNESMSVRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLEMVDDLIISEKDRNWK---------
General information:
TITO was launched using:
RESULT:
Template:
1EPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72965 for 1271 contacts (-57.4/contact) +
2D Compatibility (PS) -17661 + (NN) -4938 + (LL) 984
1D Compatibility (HY) -14800 + (ID) 4400
Total energy: -113780.0 ( -89.52 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1EPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EPZ-query.scw
PDB file :
Tito_Scwrl_1EPZ.pdb
: