Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVS-VG---RSVSSA----EAHQAIGGLLSGGKTVCGVLRPHELAFLFGESDRDEIGSAAVVSLSF-QGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
3MMH Chain:A ((14-165))
--------------------------------------------------------------------------------LYREVLPQIESVVADETDWVANLANTAAVLKEAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDAH-PD-HIACS-SLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDET-DALYLGELAKILEKRFEASRQ------
General information:
TITO was launched using:
RESULT:
Template:
3MMH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93867 for 1077 contacts (-87.2/contact) +
2D Compatibility (PS) -15258 + (NN) -7537 + (LL) 7848
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -115664.0 ( -107.39 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3MMH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MMH-query.scw
PDB file :
Tito_Scwrl_3MMH.pdb
: