Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIAGAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQFRANQTETVLDNPDPRDA
2FWJ Chain:A ((24-179))
---VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI----
General information:
TITO was launched using:
RESULT:
Template:
2FWJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130148 for 1302 contacts (-100.0/contact) +
2D Compatibility (PS) -17007 + (NN) -6681 + (LL) 352
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -174034.0 ( -133.67 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2FWJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWJ-query.scw
PDB file :
Tito_Scwrl_2FWJ.pdb
: