Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MLLGLSRSLWGYRGFV--LGSVKREFQSRYRGSLFGALWTVLNPL------SMIVVYT-----VIFSQVMRARLPGVDDGLAYSVYLCAGLLTWGLFAEITSRSQSMFIENANLLKKISFPRICLPV---IVLLNAGVNFAII----LALFLGFLALSGRLPGAALLALVPLLAIQVLFAAGLGMILGVLNVFF--RDVGQLFGICLQFWFW----------LTPIVYP---IGILPEGIRSLIELNPMTALMRSYQQLFLHGQWPDWPSLLPITLLALLLCALGLRLFRQRVGEMVDEL------------------------------------------------- |
| 1W3B Chain:B ((1-388)) | GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSV-AEAEDCYNTALRLCPTHADSYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234404 for 1961 contacts (-119.5/contact) +
2D Compatibility (PS) -27358 + (NN) -10923 + (LL) 156
1D Compatibility (HY) -800 + (ID) 2650
Total energy: -275979.0 ( -140.73 by residue)
QMean score : 0.214
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