Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALD---YLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAF--EHEFSLLGLPG--ERPAAAF------------------------SLQAQRAAGQFP-----------GWLVSALAQAGTEPEMFLPEYGQR------QYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDEALCAE---LPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
| 2BVC Chain:A ((24-464)) | ----EKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDD-GLAFDGSSIRGFQSIHES-------DMLLLPDPET-ARID--PFRAAKTLNINFFVHDPFTLE---PYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSG-----FILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLW-KDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRI-PI--TGSNPKAKR--LEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEE--AASIPQTPTQLSDVIDRLEADHEYLTEGGVFTNDLIETWISFKR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175065 for 3145 contacts (-55.7/contact) +
2D Compatibility (PS) -41044 + (NN) -20380 + (LL) 2368
1D Compatibility (HY) -18000 + (ID) 6350
Total energy: -258471.0 ( -82.18 by residue)
QMean score : 0.470
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