Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRD-LERPSDEADLASREEQRQWQLRLLEREKKLLDKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN
1TJL Chain:G ((26-149))
--------KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQM---
General information:
TITO was launched using:
RESULT:
Template:
1TJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20513 for 708 contacts (-29.0/contact) +
2D Compatibility (PS) -14510 + (NN) -15976 + (LL) 1148
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -59351.0 ( -83.83 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_1TJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TJL-query.scw
PDB file :
Tito_Scwrl_1TJL.pdb
: