Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSPLVLALALLGSLVPVSPAPGQALQRVGIVGGREAPGSKWPWQVSLRLKGQYWRHICGGSLIHPQWVLTAAHCVGPNVVCPEEIRVQLREQHLYY---QDHLLPVNRIVMHPNYYT--PENGADIALLELEDPVNVSAHVQPVTLPPALQ---TFPTGTPCWVTGWGDVHSGTPLPPPFPLKQVKVPIVENSMCDVQYHLGLSTGDGVRIVREDMLCAGN--SKSDSCQGDSGGPLVCRVRGVWLQAGVVSWGEGCAQPNRPGIYTRVAYYLDWIHQYVPKEP |
| 2WPH Chain:S ((1-234)) | ------------------------------VVGGEDAKPGQFPWQVVLNGKV---DAFCGGSIVNEKWIVTAAHCVE----TGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGS-GYVSGWGRVFHKGR--SALVLQYLRVPLVDRATCLRSTKF---------TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176268 for 1945 contacts (-90.6/contact) +
2D Compatibility (PS) -24172 + (NN) -3083 + (LL) 2116
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -221907.0 ( -114.09 by residue)
QMean score : 0.343
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