Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKKTFFVSLALALSLNAGNIQIQNMPKVKERISVPSKEDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGGVFNDPFFQQFFGDLGGMIPKERMERALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGSNKEYSATLVGTDSESDLAVIRITKDNL--PTIKFSDSNDILVGDLVFAIGNPFGVGE-SVTQGIVSALNKSGIGINSYENF-IQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGNHGIGFAIPSNMVKDIVTQLIKTGKIER----GYLGVGLQDLSGDLQNSYDNKEGAVVISVEKDSPAKKAGILVWDLITEVNGKKVKNTNEL----------RNLIGSMLPNQRVTLKVIRDKKERTFTLTLAERKNPNKKE----------------TISAQNGVQGQLNGLQVEDLTQKTKRSMRLSDDVQGVLVSQVNENSPAEQAGFRQGNIITKIEEVEVKSVADFNHALEKYKGKPKRFLVLDLNQGYRIILVK------------------------------ |
4FLN Chain:A ((42-509)) | -----------------------------------------------HDASFLNAVVKVYCTHTAPD-------YSLPW------------QKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQ------VYENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDK---YLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65490 for 3065 contacts (-21.4/contact) +
2D Compatibility (PS) -43033 + (NN) -17578 + (LL) 4436
1D Compatibility (HY) -24400 + (ID) 4700
Total energy: -150765.0 ( -49.19 by residue)
QMean score : 0.367
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