Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTKGH--KVAYLSRHEGKGDIFKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQ----LDELNVKATQKAVALCHKNQIPKLVYISANSG----YSAYIKSKRKAEQIIKAS-GLDYLFVRPGLMYGEERPLSIFQAKCIKLF-SHLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKPTQKILSIEELNNK
2BKA Chain:A ((19-219))
KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLP--DS-WASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIH
General information:
TITO was launched using:
RESULT:
Template:
2BKA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78553 for 1425 contacts (-55.1/contact) +
2D Compatibility (PS) -20613 + (NN) -14670 + (LL) 704
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -121632.0 ( -85.36 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2BKA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKA-query.scw
PDB file :
Tito_Scwrl_2BKA.pdb
: