Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLRFSSKITAPTMTLDCANASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPC-ESDGDKGRGGIKG-GFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDAL-APSGVMVSMKEPGWYSFGFEIK--DKKCDVPCIGIEMVHDGGKK---TWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
| 1F8D Chain:A ((2-386)) | ----------------------------------------------------------------------------DFNNLTKGLCTINSWHIYGKDNAVRIGE---DSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISWPLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVVFTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSC-YGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSPVLTDNPRPNDPT-VGKCNDPYPGNNNNGVKGFSYLDGV-----NTWLGRTISIASRSGYEMLKVPNA--LTDDKSKPTQGQTIVLNTDWSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121000 for 3475 contacts (-34.8/contact) +
2D Compatibility (PS) -40277 + (NN) -14519 + (LL) 6496
1D Compatibility (HY) -14800 + (ID) 5900
Total energy: -190000.0 ( -54.68 by residue)
QMean score : 0.494
|
|
|