Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNLLLLALPVLASRAYAAPAPGQALQRVGIVGGQEAPRSKWPWQVSLRVHG-PYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYY---QDQLLPVSRIIVHPQFYTAQI--GADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGN-TRRDSCQGDSGGPLVCKV-NGTWLQAGVVSWG--EGCAQPNRPGIYTRVTYYLDWIHHYVPKKP |
1BRU Chain:P ((1-239)) | ------------------------------VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCIS----SSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGA--SPDILQQGQLLVVDYATCSKPGWW-------GSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188800 for 1942 contacts (-97.2/contact) +
2D Compatibility (PS) -24903 + (NN) -8661 + (LL) 2524
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -244290.0 ( -125.79 by residue)
QMean score : 0.598
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