Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSVALPTGKPMDSHPSYTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSSHEDMPVERILEAELAVEPKTESYGDMNVENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEMLETPLQIT |
4OZT Chain:U ((1-193)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAVANICQATNSQLYQLVEWAKHIPHFSSLPIEDQVLLLRAGWNELLIAAFSHRSVEVRDGIVLGAGITVHRNSAHQAGVGTIFDRVLTELVAKMRDMNMDRTELGSLRSIILFNPEVRGLKSGQEVELLREKVYAALEEYTRVTRPEEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDIPIDTFLMDML------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127604 for 1458 contacts (-87.5/contact) +
2D Compatibility (PS) -20881 + (NN) -12688 + (LL) 10760
1D Compatibility (HY) -28400 + (ID) 7100
Total energy: -185913.0 ( -127.51 by residue)
QMean score : 0.566
|
|
|