Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS |
| 3UQG Chain:A ((25-275)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE----AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI--------------PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95375 for 1808 contacts (-52.8/contact) +
2D Compatibility (PS) -25169 + (NN) -7983 + (LL) 12112
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -139415.0 ( -77.11 by residue)
QMean score : 0.364
|
|
|