Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITASRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDGLRELLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV |
3MDY Chain:A ((37-333)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGS-WTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIF-STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI-----------------PNTRVGTKRYMPPEVLDESLNRNHFQSY-IMADMYSFGLILWEVARRCV---SGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSS-DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIKL--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171295 for 2419 contacts (-70.8/contact) +
2D Compatibility (PS) -30816 + (NN) -15572 + (LL) 10864
1D Compatibility (HY) -21600 + (ID) 4900
Total energy: -233319.0 ( -96.45 by residue)
QMean score : 0.446
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