Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE
2VTJ Chain:A ((4-287))-----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------------STAIREISLLKELN---HPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR------------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP


General information:
TITO was launched using:
RESULT:

Template: 2VTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166652 for 2003 contacts (-83.2/contact) +
2D Compatibility (PS) -27794 + (NN) -17093 + (LL) 1112
1D Compatibility (HY) -30800 + (ID) 6500
Total energy: -247727.0 ( -123.68 by residue)
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_2VTJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VTJ-query.scw
PDB file : Tito_Scwrl_2VTJ.pdb: