Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSPI-ISISNLHLSFND-----KIILNDISLDILKGESLVILGSSGSGKSVLTKTIIGLLAPDSGSIKINSKS-----------KNKFGVLFQ--NSALFDYVAVWENISFNYRKRFNISKKEAKQLAIEKLNDVGLEKNIADMFPIELSGGMKKRVALARAIAHNPEIIMLDEPTSGLDPIMSDIVKETIVKLSKDPSPTIITITHDIHDAFKIADKIAVLYEGSIISHGTVQEIKNTKNEYIKKFIRYVGTK
4MKI Chain:B ((5-235))
----MPIKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEE-TVFKDIAFG-PSNLGLSEEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGLSVPQIT
General information:
TITO was launched using:
RESULT:
Template:
4MKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112046 for 1666 contacts (-67.3/contact) +
2D Compatibility (PS) -23134 + (NN) -10113 + (LL) 368
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -164875.0 ( -98.96 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4MKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKI-query.scw
PDB file :
Tito_Scwrl_4MKI.pdb
: