Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHISKDVEKFNNSSKL-SEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
3EJB Chain:A ((20-94))
---------MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH----
General information:
TITO was launched using:
RESULT:
Template:
3EJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23942 for 481 contacts (-49.8/contact) +
2D Compatibility (PS) -8342 + (NN) -4480 + (LL) 580
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -43734.0 ( -90.92 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_3EJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EJB-query.scw
PDB file :
Tito_Scwrl_3EJB.pdb
: