Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDTEHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETVEHIVKLSRYYPQGLRSLN-GGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDDIAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDE-DIAKWQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDDG
1DXE Chain:A ((6-255))
--FPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGT--VADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP-VEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFK------
General information:
TITO was launched using:
RESULT:
Template:
1DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182767 for 2068 contacts (-88.4/contact) +
2D Compatibility (PS) -26784 + (NN) -10270 + (LL) 120
1D Compatibility (HY) -7200 + (ID) 3600
Total energy: -230501.0 ( -111.46 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DXE-query.scw
PDB file :
Tito_Scwrl_1DXE.pdb
: