Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIYFSFTGNVRRFIKRTELENTLEITAEN-CMEPVHEPFIIVTGTIGFG----EVPEPVQSFLEV--NHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
3N3A Chain:C ((23-151))
QLVYFSSSSENTQRFIERLGLP-AVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQR---------
General information:
TITO was launched using:
RESULT:
Template:
3N3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66849 for 937 contacts (-71.3/contact) +
2D Compatibility (PS) -12742 + (NN) 844 + (LL) 436
1D Compatibility (HY) -10000 + (ID) 2150
Total energy: -90461.0 ( -96.54 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3N3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3A-query.scw
PDB file :
Tito_Scwrl_3N3A.pdb
: