Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
2HVE Chain:A ((4-152))
CERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGGDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE
General information:
TITO was launched using:
RESULT:
Template:
2HVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67688 for 1112 contacts (-60.9/contact) +
2D Compatibility (PS) -16191 + (NN) -7011 + (LL) 0
1D Compatibility (HY) -17200 + (ID) 3800
Total energy: -111890.0 ( -100.62 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2HVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HVE-query.scw
PDB file :
Tito_Scwrl_2HVE.pdb
: