Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFT---------LGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLENIDLN---YSNLIVAYEPIWAIGTKKSASLEDIYLTH----GFLK----QILNQKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL |
| 1SW3 Chain:B ((44-239)) | -----------------------------------------------PSIYLDFARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGI--TEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKVATPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFVDIINAKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60982 for 1344 contacts (-45.4/contact) +
2D Compatibility (PS) -18556 + (NN) -8490 + (LL) 4288
1D Compatibility (HY) -12400 + (ID) 3500
Total energy: -99640.0 ( -74.14 by residue)
QMean score : 0.458
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