Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSNHMKNKTLVISGAT--RGIGKAILYRFAQSGVNIAFTYNK--NVEEANKIIEDVEQKYSIKAKAYPLNVLEPEQYTELFKQVDADFDRVD-FFISNAIIYGRSVVGGFAPFMRLKPKGLNNIYTATVLAFVVGAQEAAKRMQKIGGGAIVSLSSTGNLVYMPNYAGHGNSKNAVETMVKYAAVDLGEFNIRVNAVSGGPIDTDALKAFPDYVEIKEKVEEQSPLKRMGNPNDLAGAAYFLCDETQSGWLTGQTIVVDGGTTFK |
| 4BNN Chain:H ((29-277)) | -----NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP---EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSR---EGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLSSG-VTGENIHVDSGFHAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126614 for 2110 contacts (-60.0/contact) +
2D Compatibility (PS) -26473 + (NN) -9782 + (LL) 404
1D Compatibility (HY) -12400 + (ID) 4150
Total energy: -179015.0 ( -84.84 by residue)
QMean score : 0.520
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