Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTESKFPKDFLWGGAVAANQCEGAYLEDGKGLSLVDILPTVEDGRWEALFNPSKALATDYGFYPSHESIDFYHRYKEDIKLMAEMGFKCFRMSISWPRIFPNGDETTPNEKGLAFYDAVFDECHKYGIEPVVTINHFDTPLEVFKKYGGWKNRKCIDFYLNFCEAIFTRYKDKVKYWMTFNEINMILHLPYIGGGLDVTKEDNPEEVKY------QAAHHQLVASALATKLGHEINPENQIGCMLAAGNTYPMTC-NPKDVWKS-IEADREGYFFIDVQARGYYPSYT----KRFFKEHNINIKMEDGD---LDALRDHTVDYVAFSYYSSRLTSA-------------DPEKNKETEGNVFATLKNPYLKASEWGWQIDPLGLRITMNTIYDRYQ--KPLFIVENGLGAVDTVEEDGSITDDYRIDYMREHVREMGEAIEDGVELLGYTPWGCIDLVSAGSGEMKKRYGFIYVDRDNKGNGTLNRSKKKSFDWYKKVIETNGKDID |
| 4PBG Chain:B ((1-465)) | MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWD--KYLEDNYW----------------YTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEV-NEKGVEFYHKLFAECHKRHVEPFVTLHHFDTP-EALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKF-------PPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLN-DFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEF-VDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNG-YEKRYGLFYVDFD-----TQERYPKKSAHWYKKLAETQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179234 for 3762 contacts (-47.6/contact) +
2D Compatibility (PS) -45785 + (NN) -15493 + (LL) 1492
1D Compatibility (HY) -30000 + (ID) 8500
Total energy: -277520.0 ( -73.77 by residue)
QMean score : 0.529
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