Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLNIEGAKLSYQKVGQGPILIFIPGANGTGDIFLPLAEQLK-TSFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGSSSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAMQLFGETLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYTSSNISLDDFKPYV-HQITLLNGTDSKGSFPQDVNAFIAK-QLGLTIVDIPGGHLGYIQKPAGFAKVLLSIWG |
3WZM Chain:A ((21-275)) | --ISTPNGITWYYEQEGTGPDVVLVPDGLGECQMFDSSVSQIAAQGFRVTTFDMPGMSRSAKAPP------ETYTEVTAQKLASYVISVLDALDIKHATVWGCASGASTVVALLLGYPDRIRNAMCHELPTKLLDHLS-NTA--------VLEDEEISKILANVMLNDVSGGS--EAWQAMG-D---EVHARLHKNYPVWARGYPRTI-PPSAPVKDLEALRGKPLDWTVGAATPTESFFD--NIVTATKAGVNIGLLPGMHFPYVSHPDVFAKYVVETTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137418 for 2289 contacts (-60.0/contact) +
2D Compatibility (PS) -27172 + (NN) -16592 + (LL) 2176
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -186756.0 ( -81.59 by residue)
QMean score : 0.360
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