Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQFNAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAENE-DFSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAAI
2YJ7 Chain:A ((14-104))
----------EVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQP--KEALKERIDK-
General information:
TITO was launched using:
RESULT:
Template:
2YJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53905 for 607 contacts (-88.8/contact) +
2D Compatibility (PS) -9451 + (NN) -1003 + (LL) 1312
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -72447.0 ( -119.35 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2YJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YJ7-query.scw
PDB file :
Tito_Scwrl_2YJ7.pdb
: