Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRKVDEDFFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGER---TGVDVIKQAE-GSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK
1ZU4 Chain:A ((31-314))---------------------------------------------QADDEFFEELEDVLIQTDMGMKMVLKVSNLVRKKTKRD--TSFENIKDALVESLYQAYTDNDW--YRIDFKENRLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDAIKKAKEQNYDLLLIDTAGRLQNKTNLMAELEKMNKIIQQVEKSAPHEVLLVIDATTGQNGVIQAEEFSKVADVSGIILTKMDSTSKGGIGLAIKELLNIPIKMIGVGEKVDDLLAFDIDQYIVHLSSGFMQ---


General information:
TITO was launched using:
RESULT:

Template: 1ZU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171555 for 2289 contacts (-74.9/contact) +
2D Compatibility (PS) -30020 + (NN) -16050 + (LL) 2740
1D Compatibility (HY) -28800 + (ID) 6450
Total energy: -250135.0 ( -109.28 by residue)
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_1ZU4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZU4-query.scw
PDB file : Tito_Scwrl_1ZU4.pdb: