Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEP-IYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
3TQ9 Chain:A ((2-160))
IITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIGKPLPHRRNIVITQQKNLIIEGCDIFYSLDDALS-ALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKH---------FQFLELRR-
General information:
TITO was launched using:
RESULT:
Template:
3TQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96612 for 1096 contacts (-88.1/contact) +
2D Compatibility (PS) -16398 + (NN) -8275 + (LL) 352
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -137083.0 ( -125.08 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ9-query.scw
PDB file :
Tito_Scwrl_3TQ9.pdb
: