Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTVKLNNGVEVPILGFGTYQITDA--AEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGI----AASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFN---------------------DVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFN---EVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKND---------IFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV |
4JQA Chain:A ((6-302)) | -QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFN-HRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRN----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131046 for 2150 contacts (-61.0/contact) +
2D Compatibility (PS) -28330 + (NN) -14883 + (LL) 1972
1D Compatibility (HY) -25600 + (ID) 4850
Total energy: -202737.0 ( -94.30 by residue)
QMean score : 0.596
|
|
|