Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSS-------PEYMLSHTCLVREPEKFYQFVTENMYYPNAVPNVIHKKMAEIETE-KDVTIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLKSDIHTDCG------------GVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERIS-LPYPFEMMESDAVKVFEEI----------------------------------------- |
| 5BTR Chain:A ((4-390)) | DNLLFGDEIITNGSDWTPRPRIGPYTFVQQHLMIGTDPRTILKDLLPETIPPPELDDMTLWQIVINILSEPPKRKKRKDINTIEDAVKLLQESKKIIVLTGAGVSVSSGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKE-IYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRIIQCHGSFATASCLICKYKVD-CEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFDVELL-GDCDVIINELCHRLGGEYAKLSSNPVKLSEITEQYLFLPPNRYIFHGAEVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143868 for 1840 contacts (-78.2/contact) +
2D Compatibility (PS) -24411 + (NN) -9669 + (LL) 168
1D Compatibility (HY) -19200 + (ID) 3250
Total energy: -200230.0 ( -108.82 by residue)
QMean score : 0.602
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