Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVLPRV-SNGDMSHL-----------THEEIANLI---CQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTP---RSLGIDNGSVSVVDFEDGT-FSIQSIGDMSYREKGREILEKTLQ |
| 3D8H Chain:A ((20-248)) | --TYKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLKRAIMTTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETA-SKFGEDQVKIWRRSFDVPPPVLEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSI-MSGKSVLVSAHGNSLRALLYLLEGMTPEQILEVNIPTACPLVLELDDYLKVTKKYYLI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63204 for 1679 contacts (-37.6/contact) +
2D Compatibility (PS) -22318 + (NN) -6911 + (LL) 1492
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -99091.0 ( -59.02 by residue)
QMean score : 0.323
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