Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MLPEKLKTLRTEAGLTQKELAKIIQTSQQNIAYWEKGSRNPKHKSIEKLANVFNVSTDYLLGNTDLKNPNDLDIEKVKQSLKKSLGYNGTSDIPEDELESMAQAFIEHFKNQ
2KPJ Chain:A ((1-94))
MVKDKQKAIFSENLNSYIAKSEKTQLEIAKSIGVSPQTFNTWCKGIAIPRMGKVQALADYFNINKSDLIED-KKLNIDTVPIESGYTLEHHHHHH-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11406 for 474 contacts (-24.1/contact) +
2D Compatibility (PS) -9166 + (NN) -1041 + (LL) 1532
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -24381.0 ( -51.44 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2KPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KPJ-query.scw
PDB file :
Tito_Scwrl_2KPJ.pdb
: