Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQYDYIVIGGGSAGSGTANRAAMYGAKVLLIEGGQ---------VGGTCVNLGCVPKKIMWYGAQVSETLHKYSS-GYGFEVNNLNFDFTTLKANRDAYVQRSRQSYAANFERNGVEKIDGFARFIDNHTIEVNGQQYKAPHIT-----IATGGHPLYPDIIGS-ELGETSDDFFGWETLPDSILIVGAGYIAAELAGVVNELGVETHLAFRKDHILRGFDDMVTSEVMAEMEKSGISLHANHVPKSLKRDEGGKLIFEAENGKT--LVV--------------DRVIWAIGRGPNVDMGL-ENTDIVLNDKGYIKTDEFENTSVDGVYAIGDVN-GKIALTPVAIAAGRRLSERLFNHKDNEKLDYHNVPSVIFTHPVIGTVGLSEAAAIEQFGEDNIKVYTSTFTSM-YTAVTTNRQAVKMKLITLGKEE-KVIGLHGVGYGIDEMIQGFSVAIKMGATKADFDDTVAIHPTGSEEFVTMR |
| 3H4K Chain:A ((108-581)) | ----YDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVR-SILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLK----VVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGA-TELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222155 for 3628 contacts (-61.2/contact) +
2D Compatibility (PS) -47027 + (NN) -3418 + (LL) 248
1D Compatibility (HY) -35600 + (ID) 8750
Total energy: -316702.0 ( -87.29 by residue)
QMean score : 0.479
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