Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQVFQGRSFLAEKDFSREEFEYLIDFSAHLKDLKKRGVPHHYLEGKNIALLFEKTSTRTRAAFTTAAIDLGAHPEYLGAN------DIQLGK------KESTEDTAKVLGRMFDGIEFRGFSQ----------RMVEELAEFSGVPVWNGLTDEWHPTQMLADYLTIKENFGK--LEG----ITLVYCGDGRNN-VANSLLVAGTLMGVNVHIFSPKELFPAEE-IVKLAEEYAKESGAHVLVTDNVDEAVKGADVFYTDVWVSMGEEDKFKERVELLQPYQ-VNMELIKKANNDNLIFLHCLPAFHDTNTVYGKDVAEKFGVKEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGNLFIPKV |
| 3M5C Chain:A ((24-354)) | -------KHFLNTQDWSRAELDALLTQAA----LFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETIT-HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNGVFSHCLPL-----------------RRNVEATDAVMDSPNCIAIDEAENRLHVQKAIMAALV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111495 for 2551 contacts (-43.7/contact) +
2D Compatibility (PS) -32760 + (NN) -14381 + (LL) 2080
1D Compatibility (HY) -20400 + (ID) 5550
Total energy: -182506.0 ( -71.54 by residue)
QMean score : 0.580
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