Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGKGTAMAYDQIDGAPEERERGITISTAHVE--------------YETE--------------TRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEYIPTPERD-TEKPFMMPVEDVFSITGRGT--------VATGRVERGQVKVGDEVEII-GLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIIHLPEGVEMVMPGDNTEMNVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE |
| 3V11 Chain:A ((6-275)) | ---------QPEVNIGVVGHVDHGKTTLVQAITGIWTSKHS--------------EELKRGMTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTW---AENVPIIPVSALHKINIDS--------LIEGIEEYIKTPYRDLSQKPVMLVIRS-FDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRV------VSYEPIFTKI--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60886 for 1631 contacts (-37.3/contact) +
2D Compatibility (PS) -24109 + (NN) -5506 + (LL) 10116
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -104985.0 ( -64.37 by residue)
QMean score : 0.335
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