Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
2RGX Chain:A ((1-203))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHG---NVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPP-PPGV------KVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIG----
General information:
TITO was launched using:
RESULT:
Template:
2RGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74237 for 1571 contacts (-47.3/contact) +
2D Compatibility (PS) -22351 + (NN) -14459 + (LL) 80
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -135767.0 ( -86.42 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2RGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RGX-query.scw
PDB file :
Tito_Scwrl_2RGX.pdb
: