Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MKSRGLVRFFFSILAVGALITS--------IVGFALKWGEYRGLFLTFEAGQIFSVLFWFI-----------GVGMIFSVISQMGFFVFLTVH------RFALEILRSSSLWNLLQLFFILFVAFDLMYVRFLFFGESGESLAGYAWLPVFLLIFGVITAYIKQKQSSKKTFVSSL--FLMVVITALEWFPALRVND------EDWLYLMLFPLMACNAFQ-------LLMLPKFAAK-- |
| 4AW9 Chain:A ((1-263)) | GGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFPNEDLHVKDLNETIHYMYK-----HKMYRKMVFYIEACESGSMMNHLPDNINVYATTAAN--PRESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTQTSHVMQYGNKTISTMKVMQFQGMKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204148 for 1350 contacts (-151.2/contact) +
2D Compatibility (PS) -19280 + (NN) 6359 + (LL) 1044
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -221225.0 ( -163.87 by residue)
QMean score : 0.081
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