Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQK-AKLPTHVEIDAKRYGFERDSVILLEQIRTIDK-QRLTDKITHLDDEMMDKVDEALQISLALIDF
1M1F Chain:A ((1-110))--MERGEIWLVSLDPTAGHEQQGTRPVLIVTPAAFNRVTRLPVVVPVTS---FARTAGFAVSLD--GVGIRTTGVVRCDQPRTIDMKARGGKRLERVPETIMNEVLGRLSTILT----


General information:
TITO was launched using:
RESULT:

Template: 1M1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 477 -60869 -127.61 -579.70
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -127.61
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_1M1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M1F-query.scw
PDB file : Tito_Scwrl_1M1F.pdb: