Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MHTVTQTSLYGKDLLTLKDLSEEDINALLAEAGELKQNKIQPIFHGKTLAMIFEKSSTRTRVSFEAGMAQLGGSALFLSQ-KD-----LQLGR---GET---VADTAKVLSGYVDAIMIRTF----------EHEKVEELAKEADIPVINGLTDKYHPCQALADLLTIKE------IKGKLKGVKVAYIGDGNN--VAHSLMIGCAKMGCDISIASPKGYEVLDEA-AEAAKTYALQSGSSVTLTDDPIEAVKDADVIYS------DVFTSMGQEAEEQERLAVFAPYQVNAALVSHAKPDYTFLHCLPAHREEEVTAEIIDGPNSAVFQQAENRLHVQKALLKAILYKGESSKNC 3M5C Chain:A ((24-354)) -----------KHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVIN-METITHPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNG----VFSHCLPLRRNVEATDAVMDSPNCIAIDEAENRLHVQKAIMAALV---------

General information: TITO was launched using: RESULT: Template: 3M5C.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1602 -166540 -103.96 -566.46 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain A : 0.77 3D Compatibility (PKB) : -103.96 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.528

(partial model without unconserved sides chains): PDB file : Tito_3M5C.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3M5C-query.scw PDB file : Tito_Scwrl_3M5C.pdb: