Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTLNNISKSYKLGKEEVPILKHINLTVQAGEFLAIMGPSGSGKSTLMNIIGCLDRPTSGTYTLDQIDILKGKDGALAE---IRNESIGFVFQTFHLLPRLTALQNVELP---MIYNKVKKKERRQRAYEALEKV--GLKDRVSYKPPKLSGGQKQRVAIARALVNQPRFILADEPTGALDTKSSEQILALFSELHR--EGKTIIMITHDPDVAKKADRTVFIRDGELVLDERGDISHA
2FF7 Chain:A ((8-222))-ITFRNIRFRYK--PDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLID------GHDLALADPNWLRRQ-VGVVLQDNVLLNR-SIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIM---RNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIV----------


General information:
TITO was launched using:
RESULT:

Template: 2FF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 978 -36392 -37.21 -177.52
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -37.21
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_2FF7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FF7-query.scw
PDB file : Tito_Scwrl_2FF7.pdb: