Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANK---DGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFA
5C7H Chain:A ((5-269))IPTIAFP-DGRKVPALGQGTWRMGEN-RA---KTADEVRSLQTGLDLGMTLIDTAEMYGDGAAERIVGEAIKGR-RDEAFVVSKVLP--------SNASRAGTVAACERSLRNLGIDCVDLYLLHWRGGY-PLAETVAAFEELKKAGKIRAWGVSNFDVDDMEELSAVPDGGNVAANQVLYNLARRGIEFDLLPRCRAQGVPVMAYSPLDEGRLLHD-------------------------------ADLIHIAKAHQATPAQVALAFLKTCSGV-ISIPKTGSPERARENRDAMDIHLTTENLAELDRHF-


General information:
TITO was launched using:
RESULT:

Template: 5C7H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1463 -58036 -39.67 -221.51
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -39.67
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_5C7H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C7H-query.scw
PDB file : Tito_Scwrl_5C7H.pdb: