Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAP-IAATRMTQDILPPEVLEKLT----------PEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGNDGANFDKPPSVQDVAARWAEITDLSGAKIAGFKL |
3VZS Chain:D ((11-239)) | --GSTQRIAYVTGGMGGIGTAICQRLAKDGFRVVA--------GCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAI-RQDVLDKIVATIPVKRLGLPEEIASICAWLSSEE--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126651 for 1771 contacts (-71.5/contact) +
2D Compatibility (PS) -23323 + (NN) -9247 + (LL) 3028
1D Compatibility (HY) -10000 + (ID) 3800
Total energy: -169993.0 ( -95.99 by residue)
QMean score : 0.482
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